Research Interests
PhD student working on statistical approaches to the phylodynamics of fast-evolving pathogens. Main interests include: transition kernels for MCMC in Bayesian phylogenetics, model adequacy, integrating epidemiological and (phylo) genomic information.
Publications
Total publications: 5
- Virus genomes reveal the factors that spread and sustained the West African Ebola epidemic.
- Dudas G, Carvalho LM, Bedford T, Tatem AJ, Baele G, Faria NR, ..., Suchard MA, Lemey P & Rambaut A (2017) Nature 2017/04/12/online
- Ebola Virus Glycoprotein with Increased Infectivity Dominated the 2013-2016 Epidemic.
- Diehl WE, Lin AE, Grubaugh ND, Carvalho LM, Kim K, Kyawe PP, McCauley SM, Donnard E, Kucukural A, McDonel P, Schaffner SF, Garber M, Rambaut A, Andersen KG, Sabeti PC & Luban J (2016) Cell 167, 1088-1098.
- Comment on "Mutation rate and genotype variation of Ebola virus from Mali case sequences".
- Rambaut A, Dudas G, Carvalho LM, Park DJ, Yozwiak NL, Holmes EC & Andersen KG (2016) Science 353, 658.
- Exploring the temporal structure of heterochronous sequences using TempEst.
- Rambaut A, Lam TT, Carvalho LM & Pybus OG (2016) Virus Evolution 2, vew007.
- πBUSS: a parallel BEAST/BEAGLE utility for sequence simulation under complex evolutionary scenarios.
- Bielejec F, Lemey P, Carvalho LM, Baele G, Rambaut A & Suchard MA (2014) BMC Bioinfomatics 15, 133.
